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Re: bUnwarpJ - loading mask from macro

Posted by Ignacio Arganda-Carreras on Jun 22, 2011; 8:18pm
URL: http://imagej.273.s1.nabble.com/bUnwarpJ-loading-mask-from-macro-tp3684161p3684166.html

Hello everybody,

Sorry to answer so late. Jamie is right. The only way to load a mask from a
macro in bUnwarpJ is to add the mask image as a the second slice of the
source or target images.

If someone else is interested on doing it explicitly with a macro command, i
could add that code.

Cheers!

ignacio

On Wed, Jun 15, 2011 at 11:50 AM, jamier <[hidden email]>wrote:

> Hi Curtis,
>
> Thanks for the suggestion. It appears that the load call does not work when
> bUnwarpJ is run in a macro. I am unsure whether this is a bug as I have
> discovered an alternative route for loading masks within a macro (from the
> authors documentation no less ).
>
> All that is required is to add a slice to the image I wish to register and
> copy a saved mask into the stack. When bUnwarpJ is loaded the mask is
> automatically included.
>
> Thanks for the help,
> Jamie
>
> --
> View this message in context:
> http://imagej.588099.n2.nabble.com/bUnwarpJ-loading-mask-from-macro-tp6470081p6479417.html
> Sent from the ImageJ mailing list archive at Nabble.com.
>



--
Ignacio Arganda-Carreras, Ph.D.
Seung's lab, 46-5065
Department of Brain and Cognitive Sciences
Massachusetts Institute of Technology
43 Vassar St.
Cambridge, MA 02139
USA

Phone: (001) 617-452-4976
Website: http://bioweb.cnb.csic.es/~iarganda/index_EN.html