Login  Register

Re: 3D Varian FDF file problem

Posted by Daniel James White on Feb 26, 2010; 9:01am
URL: http://imagej.273.s1.nabble.com/3D-Varian-FDF-file-problem-tp3685028p3685029.html

Hi Hannes

Begin forwarded message:

> Date:    Thu, 25 Feb 2010 11:20:47 -0800
> From:    deutschmed <[hidden email]>
> Subject: 3D Varian FDF file problem
>
> Hi,
>
> I am trying to open MRI images with the multi FDF opener plugin. I  
> can open
> the files (i.e. the plugin runs) but the images are all black. This  
> includes
> 2D and 3D images.
>
> What can I do to display the images?
>

did you try to adjust the brightness and contrast
(image - adjust - brightness contrast)
the auto button might get you close.

are all the pixels of value 0?  - look on the main tool bar window as  
you move the mouse pointer over the image


> Thanks so much for the help!
>


no probs


this plugins code might be good to include in bio-formats,,, Curtis?


Dan




Dr. Daniel James White BSc. (Hons.) PhD
Senior Microscopist / Image Processing and Analysis
Light Microscopy Facility
Max Planck Institute of Molecular Cell Biology and Genetics
Pfotenhauerstrasse 108
01307 DRESDEN
Germany

+49 (0)15114966933 (German Mobile)
+49  (0)351 210 2627 (Work phone at MPI-CBG)
+49  (0)351 210 1078 (Fax MPI-CBG LMF)

http://www.bioimagexd.net                BioImageXD
http://pacific.mpi-cbg.de                Fiji (is just ImageJ - batteries included)
http://www.chalkie.org.uk
[hidden email]
( [hidden email] )