Re: Analyzing adjacent ROIs

Posted by Michael Doube on Mar 23, 2011; 11:11pm
URL: http://imagej.273.s1.nabble.com/Analyzing-adjacent-ROIs-tp3685285p3685291.html

> I have some long bone sections with staining, and I'm trying to find
> out if there's a gradient, as in more staining towards the center
> compared with toward the periphery.

A bone question! Excellent.  Are your sections roughly annular, like
transverse sections through the cortex of a long bone?  Could you post
an image of your section on the web somewhere we could see it?

I can imagine one solution to this; draw an ROI that is the periosteal
surface and another ROI that is the endosteal surface. Then (hard part,
don't know if it's implemented) create multiple new ROIs interpolating
between the landmark ROIs, and measure the staining between adjacent
pairs of ROIs.

I just thought of a way to do the interpolated ROIs, so it can't be
*that* difficult...

Michael