Corrupted images when using bioformat import to open compressed dcm files
Posted by Anja on Mar 18, 2011; 12:34pm
URL: http://imagej.273.s1.nabble.com/Corrupted-images-when-using-bioformat-import-to-open-compressed-dcm-files-tp3685362.html
I installed the loci_tools.jar plugin in order to open a folder of compressed Dicom Files in Image J.
The Plugin works, but unfortunately there is a problem. If I open a whole folder of dcm files with it the pictures look kind of corrupted ( here is a screenshot:
)
But when I say "treat like singe object" and open only one dcm file it is not corrupted ( see screenshot:
).
Do you have an idea why the plugin can open a single picture but shows a stack in this corrupted style?
I am new to Image J and dcm image processing and would be very glad if you could help me...
Greetings,
Anja
URL: http://imagej.273.s1.nabble.com/Corrupted-images-when-using-bioformat-import-to-open-compressed-dcm-files-tp3685362.html
I installed the loci_tools.jar plugin in order to open a folder of compressed Dicom Files in Image J.
The Plugin works, but unfortunately there is a problem. If I open a whole folder of dcm files with it the pictures look kind of corrupted ( here is a screenshot:
)
But when I say "treat like singe object" and open only one dcm file it is not corrupted ( see screenshot:
).
Do you have an idea why the plugin can open a single picture but shows a stack in this corrupted style?
I am new to Image J and dcm image processing and would be very glad if you could help me...
Greetings,
Anja
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