Re: Watershed question

Posted by Michael Schmid on
URL: http://imagej.273.s1.nabble.com/Watershed-question-tp3685658p3685666.html

Hi Natasha,

you could also try the built-in command 'Find Maxima' which has a  
'Segmented Particles' output. This also does a watershed segmentation  
of the image data (in contrast to Process>Binary>Watershed, which  
does watershed segmentation of the distance map)

Michael
________________________________________________________________

On 11 Jun 2010, at 16:43, NatashaW wrote:

> Dear all,
>
> I am using Daniel's watershed algorithm to separate some particles,
> but I don't know how to use it in the macro..
> I found a macro to use it in this way:
> run("Watershed ", "blurring='1.0'   watershed='0 1 0 170 0 1'    
> display='6 5
> 4 3 2 1 0' ");
> (The link is http://bigwww.epfl.ch/sage/soft/watershed/ 
> Watershed_Demo.txt )
> and it didn't work..
>
> I also read Gabriel's post to use it by as plug-in in this link:
> http://imagej.588099.n2.nabble.com/need-help-on-various-watershed- 
> segmentation-algorithms-td635524.html#a635524
> and it also didn't work!!
> Could anyone help me to solve this problem? Maybe something new  
> which i
> don't know?
> Thank you so much
>