Re: Plot profile

Posted by Tiago Ferreira-2 on Dec 14, 2010; 7:37pm
URL: http://imagej.273.s1.nabble.com/Plot-profile-tp3686149p3686151.html

Hi Mendo,

We've written a macro for a very similar purpose.
Have a look here:
<https://dl.dropbox.com/s/e9i5bihrxi9zc0x/Segment_Profile.ijm>

-tiago

On 2010.12.14, at 11:22 , Mendoza Rodriguez wrote:

> Hello,
> I would like to measure distances between regions of higher intensity  
> by using the plot profile feature. To do that I draw a line over the  
> image, I plot the profile and I use the multi-point tool to mark  
> intensity peaks of interest. The problem is that if I use the  
> "measure" command I get values based on the source image scaling, not  
> on the "plot profile image". I can see that I get appropriate values  
> by moving the cursor over the plot or by clicking on the list value,  
> but I would like to retrieve only the values that I mark.
> Any idea?
> Mendo