Posted by
JimmiB on
URL: http://imagej.273.s1.nabble.com/Image-Registration-tp3686174p3686176.html
Thanks Stephan,
I have already played with these plugins but cannot get them
to do what i want. The Transform Virtual Stack Slices plugin
appears to require a separate transformation file for every
image, what i want to do is apply a single transformation to
multiple images. Is this possible with those plugins?
James
>
>Check the Fiji plugins
>
>Register Virtual Stack Slices
>
>
http://pacific.mpi-cbg.de/wiki/index.php/Register_Virtual_Stack_Slices
>
>and
>
>Transform Virtual Stack Slices
>
>
http://pacific.mpi-cbg.de/wiki/index.php/Transform_Virtual_Stack_Slices
>
>they incorporate bUnwarpJ, feature based registration and
allow you to
>save the estimated transformation and apply it to other
images later.
>
>Good luck,
>Stephan
>
>
>On Wed, 2010-12-15 at 11:24 +1100, James Burchfield wrote:
>> I am looking for a simple way to measure the transformation
>> required to achieve proper image registration between a set
of
>> reference images and then to apply this same transformation
to a
>> stack.
>> I have been able to achieve fantastic results with bUnwarpJ
on
>> the reference image, but cannot work out how to apply this
to
>> other images.
>> MultiStackReg works well on some data sets, but ideally i
would
>> like to apply exactly the same transformation to every
image.
>> Cheers,
>> James