Posted by
Gabriel Lapointe-2 on
Oct 21, 2010; 2:38pm
URL: http://imagej.273.s1.nabble.com/Circularity-tp3686600p3686601.html
Hi Jules,
The parameter you are looking for in Analyse>Set_Measurments... is
Shape_descriptors.
Cheers
Gabriel Lapointe, MSc.
Laboratoire de Luc DesGroseillers, PhD.
Pavillon Roger-Gaudry Local A-538
Département de biochimie
Faculté de Médecine de l'Université de Montréal
2900 boul. Édouard-Montpetit,
Montréal, Qc, H3T 1J4
Tel : (514) 343-6111 postes 5187, 5152, 5162 ou 1048
Fax : (514) 343-2210
[hidden email]
http://gabriellapointe.ca
On Thu, 2010-10-21 at 14:24 +0100, Julian Thorpe wrote:
> Dear All,
> I am a very new user of ImageJ and want to analyse nuclei within TEM
> images, as my experimental cells visually have more invaginations in the
> nuclear envelope than the 'controls'. I thought that the 'circularity'
> option would be the best way to go, but it does not appear in the
> 'Analyse'/'Set Measurements' window, despite the ImageJ site saying
> "Circularity calculations are built into ImageJ 1.29 and later...." at
> <
http://rsbweb.nih.gov/ij/plugins/circularity.html>
> Can anyone please help with this, or indeed suggest another approach I
> could use?
> Many thanks in advance,
> Jules
>
> Dr. Julian R. Thorpe
> (Office 2C9/Lab 2C11-13)
> Electron Microscope Division,
> The Sussex Centre for Advanced Microscopy,
> John Maynard-Smith Building,
> School of Life Sciences,
> University of Sussex,
> Falmer,
> Brighton BN1 9QG
> Tel.: ext +44 (0)1273 877585
> int 7585
>
> URLs:
> (home)
>
http://www.sussex.ac.uk/biology/profile2686.html> (lab)
>
http://www.lifesci.susx.ac.uk/Home/Julian_Thorpe/cover.htm> (research)
>
http://www.lifesci.susx.ac.uk/Home/Julian_Thorpe/ad_cover.htm