Thanks a lot. I've just had a go and now I can get my data I think!
> Hi Jules,
> The parameter you are looking for in Analyse>Set_Measurments... is
> Shape_descriptors.
>
> Cheers
> Gabriel Lapointe, MSc.
> Laboratoire de Luc DesGroseillers, PhD.
> Pavillon Roger-Gaudry Local A-538
> Département de biochimie
> Faculté de Médecine de l'Université de Montréal
> 2900 boul. Édouard-Montpetit,
> Montréal, Qc, H3T 1J4
> Tel : (514) 343-6111 postes 5187, 5152, 5162 ou 1048
> Fax : (514) 343-2210
>
[hidden email]
>
http://gabriellapointe.ca>
> On Thu, 2010-10-21 at 14:24 +0100, Julian Thorpe wrote:
>
>> Dear All,
>> I am a very new user of ImageJ and want to analyse nuclei within TEM
>> images, as my experimental cells visually have more invaginations in the
>> nuclear envelope than the 'controls'. I thought that the 'circularity'
>> option would be the best way to go, but it does not appear in the
>> 'Analyse'/'Set Measurements' window, despite the ImageJ site saying
>> "Circularity calculations are built into ImageJ 1.29 and later...." at
>> <
http://rsbweb.nih.gov/ij/plugins/circularity.html>
>> Can anyone please help with this, or indeed suggest another approach I
>> could use?
>> Many thanks in advance,
>> Jules
>>
>> Dr. Julian R. Thorpe
>> (Office 2C9/Lab 2C11-13)
>> Electron Microscope Division,
>> The Sussex Centre for Advanced Microscopy,
>> John Maynard-Smith Building,
>> School of Life Sciences,
>> University of Sussex,
>> Falmer,
>> Brighton BN1 9QG
>> Tel.: ext +44 (0)1273 877585
>> int 7585
>>
>> URLs:
>> (home)
>>
http://www.sussex.ac.uk/biology/profile2686.html>> (lab)
>>
http://www.lifesci.susx.ac.uk/Home/Julian_Thorpe/cover.htm>> (research)
>>
http://www.lifesci.susx.ac.uk/Home/Julian_Thorpe/ad_cover.htmDr. Julian R. Thorpe