Re: Threshold auto-reset when clicking back on the Threshold window

Posted by ved sharma-2 on Sep 08, 2010; 3:30am
URL: http://imagej.273.s1.nabble.com/Analyse-particles-does-never-start-for-stack-analysis-tp3686990p3686995.html

Hi Jocelyn,

I had a similar situation when I was working with some 16-bit image stacks. In my case, I wanted to keep the upper threshold value = global maximum pixel value, and adjust the lower threshold value until it was OK for all the slices in the stack.

What I did was to first find out the slice which contains the maximum pixel value, bring the upper threshold to max, adjust the threshold of that slice, then go to all the other slices in the stack and adjust lower threshold value. After I found the minimum threshold value which works for all the slices, I clicked apply and it applied those min and max settings for all the slices.

Ved