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Re: 3D nearest neighbour vector

Posted by Marcel on Aug 26, 2010; 10:54am
URL: http://imagej.273.s1.nabble.com/3D-nearest-neighbour-vector-tp3687168p3687169.html

Hello,

i would recommend you to use "R" (after your ImageJ measurements)
 
http://www.r-project.org/

with the "spatstat" package
 
http://www.spatstat.org/spatstat/

which can calculate nearest neighbour distances in 3d, Ripley`s K function in 3d etc.
You can calculate it in Java (by yourself) but i think the spatstat package has many useful methods
already available for your analysis.