Analyze particles - pixel unit option

Posted by Ghislain BUGNICOURT-2 on Jul 22, 2010; 11:32am
URL: http://imagej.273.s1.nabble.com/Analyze-particles-pixel-unit-option-tp3687491.html

Dear all,

I use something like this in a plugin :
> IJ.run("Analyze Particles...", " size=0-44 circularity=0-1  
> show=Nothing clear add");
Usually, it works well with my tif images.
Nevertheless, I met a problem with tif images coming from another  
acquisition software : this software includes data about "real"  
dimensions to the tif images. So the option "size=0-44" isn't  
considered as in pixels anymore.
That leads to three questions :
  - First of all, is there another way to call "analyze particles"  
from a plugin ? I just copied this from an example...
  - What should I add to "size=0-44" so that the option "pixels unit"  
is set true ?
  - More generally, if the answer to my first question is "no", where  
can I find a description of the possible options to use with IJ.run
("command","options") ?

Thanks
Regards,
Ghislain