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Re: ImageJ/Fiji Memory issues - actually an OSX disk image misunderstanding problem

Posted by Barron, Francie on Jul 21, 2010; 12:02am
URL: http://imagej.273.s1.nabble.com/Re-ImageJ-Fiji-Memory-issues-actually-an-OSX-disk-image-misunderstanding-problem-tp3687536p3687539.html

I first downloaded Fiji prior to the updater bug fix.  When I updated, I couldn't reopen the program.  I found that I could run it via the disk image, and didn't seem to have a problem with function.  It was only until much later that I had some memory issues and couldn't increase the memory due to the problem that started this whole thread.  I had forgot that I was running it off the disk image as I made an alias for my doc for ease in opening the program. When people suggested that my issue was the disk image, I remembered what I had done.  I did try to run the updater bug fix downloaded from the Fiji website, but for some reason encountered an error.  In frustration, I deleted Fiji and decided to start from scratch (a "if all else fails delete and reload drivers" sort of philosophy).  I then appropriately loaded the program into my applications file, and was able to properly edit the Memory to allow function (it had been previously set for 300mb -- my RAM is 2GB, so an increase in allocation was definitely possible).  I hope that clarifies my logic and relation to some degree!

Again, thanks everyone for the help.  I appreciate the patience for the neophytes.

Best,
~Francie

NOTE NEW EMAIL ADDRESS:  [hidden email]

***************************************************************

Francie Barron (Hyndman), Graduate Student
Cells Biology, Stem Cells, and Development Program
Dr. David Clouthier lab, Craniofacial Biology

For Correspondence:
University of Colorado, Health Sciences Center
Department of Craniofacial Biology
Mailstop 8120
P.O. Box 6511
Aurora, CO 80045

For Deliveries:
University of Colorado Denver Health Sciences Center
Department of Craniofacial Biology
Building RC1 South, Room 11400B
12801 East 17th Avenue
Aurora, Co 80010

Lab: 303-724-4566
Fax: 303-724-4580

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________________________________________
From: Johannes Schindelin [[hidden email]]
Sent: Tuesday, July 20, 2010 4:09 PM
To: Barron, Francie
Cc: [hidden email]
Subject: Re: ImageJ/Fiji Memory issues - actually an OSX  disk image misunderstanding problem

Hi,

On Tue, 20 Jul 2010, Barron, Francie wrote:

> Thanks for the information.  Yes, I had forgot that I was running from
> the .dmg/disk image file since I fell prey to the updater bug on OSX and
> did not realize there was a fix.  I deleted and redownloaded an updated
> Fiji version and all was fixed!

Well, there is a prominently featured fix for the updater bug. And I fail
to see how the .dmg issue and the updater bug and the deletion and
redownloading are related.

Ciao,
Johannes