Re: LIF reader

Posted by W. Chan on Jun 19, 2010; 11:20pm
URL: http://imagej.273.s1.nabble.com/LIF-reader-tp3687880p3687886.html

Hi Glen

This is interesting to find that HandleExtraFileTypes resolve the LIF
reading problem.  Last month, one of our users on a Mac was getting this
error with a then current trunk build.

"java.lang.IndexOutOfBoundsException: Index: 1, Size: 0"

I gave her an older working jar on my machine which is rev 5770, built
4 Jan 2010 and that has been working fine for her since.  I'll check her
plugins if the problem comes up again.  Thanks for the heads up.

On Sat, 19 Jun 2010, Glen MacDonald wrote:

> Installing the HandleExtraFileTypes plugin allowed use of drag and drop
> to work with LIF.  Now calling the plugin from the menu also works with
> LIF and Olympus OIB.
>
> Glen
>
> On Jun 19, 2010, at 8:09 AM, Glen MacDonald wrote:
>
> > Hello,
> > Does anyone have a plugin or macro that will read the Leica LIF format?  LOCI-tools 4.1.1, 12-3-09 and the current trunk build 6537 are throwing exceptions.
> > Mac OSX10.6.3, ImageJ 1.44c.
> >
> > Thanks,
> > Glen

--
Pang (Wai Pang Chan, [hidden email], PAB A087, 206-685-1519)
The Biology Imaging Facility (http://depts.washington.edu/if/)