Re: problem opening fluoview 1000 linescan files

Posted by Melissa Linkert-2 on
URL: http://imagej.273.s1.nabble.com/problem-opening-fluoview-1000-linescan-files-tp3687969p3687970.html

Hi Karl,

Which version of Bio-Formats are you using?  The two most recent
stable versions (4.1 and 4.1.1) should display linescan files in the
same way that Olympus' software does, i.e. a single plane represents
the entire scan.  You can see which version of Bio-Formats is
installed by selecting "Help > About Plugins > LOCI Plugins".

If you are using a version prior to 4.1, then I would recommend that
you update to the latest stable version.  If you still see the problem
with 4.1.1, then it would be very helpful if you could send one of the
problematic files and a list of any options that you have checked in
the Bio-Formats import options window.

Regards,
-Melissa

On Wed, Jun 2, 2010 at 10:41 PM, kjiremon <[hidden email]> wrote:

> Hi,
> When I try to open linescan files (.oib) acquired in Olympus Fluoview 1000,
> ImageJ will open a file with pixel values for the first scanned line but no
> data for the other subsequent lines.
> Do I need to do something special when importing these file types? I use the
> bio-formats importer for other types of fluoview obi files and it seems to
> work fine.
>
> Thanks
>
> Karl
>
> --
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>