Posted by
Michael Ellis on
Jun 08, 2010; 4:45pm
URL: http://imagej.273.s1.nabble.com/Composite-Palette-Interactive-adjustment-for-CompositeImages-tp3687979p3687980.html
Dear List
I've been recently been developing some ImageJ plugins and although
probably primarily of use to our existing SmartType and SmartCapture
customers, they may be of some general interest so hence this post.
PlugIns
- Composite_Palette - Interactive adjustment for CompositeImages
- SmartType_Readrer - Reads SmartType karyotype files storing
chromosome boundaries in the ROI Manager
- Barrel_Shifter - Barrel shift for images
Probably the plugin of most utility is the Composite_Palette for
Interactive adjustment of the levels for CompositeImages (byte and
short only).
The plugins (and pictures) are available at
http://www.dsuk.biz/DSUK/ImageJ_PlugIns.htmlIt's certainly been an interesting learning exercise and at some point
I may share some of the source code for the more interesting aspects
like how to introduce threading to improve user interface
responsiveness in a manner that avoids all those nasty gotcha's that
using threads can introduce (and in a manner that is easy enough for
dummys like me!)
Feedback and bug reports appreciated!
P.S. Next feature on the list for Composite_Palette is copy and paste
the histogram settings between images. After that, channel
registration and other features may follow - watch this space!
P.P.S. (Apologies for repost but previous post to list seemed to only
result in a graphic being posted and the text being lost so here is a
picture free plaint text version that should get through)
P.P.P.S I would like to thank Bill Mohler and Gabriel Landini for
their patients and assistance with this endeavour.
P.P.P.P.S As soon as possible I will add a list of known bugs and
features to the website (thanks Bill, for your input here)
Michael Ellis
Managing Director
Digital Scientific UK Ltd.
http://www.digitalscientific.co.uk[hidden email]
tel: +44(0)1223 329993
fax: +44(0)1223 370040
Sheraton House
Castle Park
Cambridge
CB3 0AX
The contents of this e-mail may be privileged and are confidential.
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Michael Ellis
Managing Director
Digital Scientific UK Ltd.
http://www.digitalscientific.co.uk[hidden email]
tel: +44(0)1223 329993
fax: +44(0)1223 370040
Sheraton House
Castle Park
Cambridge
CB3 0AX
The contents of this e-mail may be privileged and are confidential.
It may not be disclosed to or used by anyone other than the
addressee(s), nor copied in any way. If received in error, please
advise the sender and delete it from your system.