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Re: temporal smoothing

Posted by lechristophe on Jun 07, 2010; 11:00am
URL: http://imagej.273.s1.nabble.com/temporal-smoothing-tp3688031p3688032.html

Hi Sandrine,

Have a look at this plugin : Running Z projector by Nico Stuurman

http://valelab.ucsf.edu/~nico/IJplugins/Running_ZProjector.html

There is also a Kalman averaging filter plugin for more complex
temporal averaging.

http://rsbweb.nih.gov/ij/plugins/kalman.html

Cheers,

Christophe


--
Christophe Leterrier
Postdoc
INSERM UMR641 // Ionic channels Lab
IFR Jean Roche, Mediterranée University
Marseille, France
[hidden email]



On Mon, Jun 7, 2010 at 12:10, POUVREAU SANDRINE
<[hidden email]> wrote:
> Hello everyone.
> I am looking for help with temporal smoothing in stacks. I am recording time series of XY images with a Zeiss microscope, that I open as stacks with Image J. I am already doing median filtering within one image, but I also would like to do smoothing between adjacent images (temporal smoothing). How can I do that?
> Thanks
> Sandrine Pouvreau
>