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Re: Opening hyperstacks with gaps between frames rather than every image

Posted by Daniel Kalthoff on Apr 15, 2010; 5:31pm
URL: http://imagej.273.s1.nabble.com/Opening-hyperstacks-with-gaps-between-frames-rather-than-every-image-tp3688558p3688559.html

Hi Josh,

may I suggest a workaround?

Import your files as "raw" and use the gap between channels in bytes. As the height, use 3-fold (or according number of channels) the height of the original images. Create a montage from the resulting images using number of frames as number of columns. With this big montage (rows = channels / cols = frames) use the "Stack Maker" plugin to create one stack which should have the order "xyztc" an can be turned into the desired HyperStack accordingly.
Should be a piece of cake to put this into a Macro...

Best regards,

Daniel