Posted by
Joachim Wesner on
Feb 22, 2010; 6:43pm
URL: http://imagej.273.s1.nabble.com/Augmenting-an-ImagePlus-with-Additional-Information-tp3689248p3689249.html
Hi,
I have/had the same problem to read some proprietary Tiff files with extra
tags whose info should be available later in ImageJ.
You can use ImagePlus´ getProperty/setProperty to do this, but I am not
sure if these properties will survive duplication
(actually I fear they will not), it was not yet important for me! (I also
wrote a macro helper function to read these properties)
Cheers.
Mit freundlichen Grüßen / Best regards
Joachim Wesner
www.leica-microsystems.com
Michael Ellis
<michael.ellis@DI
GITALSCIENTIFIC.C An
O.UK>
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Augmenting an ImagePlus with Additional Information
I am writing an ImageJ plugin to read our proprietary file format. Our
files are karyotyping files that contain zipped up TIFF files, polygon
data describing the chromosome boundaries and various other metrics.
So far I can load the image files and I'm adding the list of polygon
boundaries as PolygonRoi's to the ROIManager. However, if I use our
plugin to load a s second karyotype file, then I have either to append
to, or replace the contents of the ROIManager. I'd prefer to associate
the list of PolygonRoi's with the image.
So how best to do this?
Subclassing the ImagePlus might work, but I'm not a fan of type
casting; I suspect that it would have gotchas like having ImageJ's
"Duplicate" command lose the additional information.
Is there any other robust means of augmenting an image with additional
information?
Michael Ellis
Managing Director
Digital Scientific UK Ltd.
http://www.digitalscientific.co.uk[hidden email]
tel: +44(0)1223 329993
fax: +44(0)1223 370040
Sheraton House
Castle Park
Cambridge
CB3 0AX
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