Re: quantify clustering

Posted by Mark Krebs on Feb 19, 2010; 4:47pm
URL: http://imagej.273.s1.nabble.com/quantify-clustering-tp3689322p3689323.html

Hi,

You might take a look at CellProfiler at http://www.cellprofiler.org/.  I believe one of their examples
(Speckle Counting) shows how to identify, quantify and characterize bright spots within the nuclei of
multiple cells.  With some tweaks you might be able to use their approach to analyze spots of
fluorescence on the nuclear membrane.

Cheers,
Mark