Re: Deleting ROIs during a macro

Posted by Michael Schmid on Feb 04, 2010; 1:38pm
URL: http://imagej.273.s1.nabble.com/Deleting-ROIs-during-a-macro-tp3689491p3689494.html

Hi Elisabeth,

no problem here. While the "Wait for user" panel is visible, I can  
select ROIs in the ROI manager and they are shown in yellow on the  
image.

My configuration: Mac OS X 10.4.11, ImageJ 1.43o, Java 1.5.0_19

Did you try, does it work outside a macro? Did you try to restart  
ImageJ (in case something weird has happened and corrupted something)?

Michael
________________________________________________________________

On 4 Feb 2010, at 13:29, ElisabethT wrote:

> Hi Michael,
>
> Thanks for the suggestion, but unfortunately "waitForUser" produces  
> the same
> results.
>
> Elisabeth
>
>
>
> Hi Elisabeth,
>
> wait(10) waits for 10 milliseconds.
> I am not sure that you are that fast ;-)
>
> By the way, maybe the "waitForUser" macro command would be better?
>
> Michael
> ________________________________________________________________
>
> On 4 Feb 2010, at 12:05, ElisabethT wrote:
>
>> Hi there,
>>
>> I am running a macro and would like to pause the macro after ROI
>> selection,
>> to delete any ROIs that are not 'good', then would like to continue
>> to run
>> the macro so that the measurements are made.
>>
>> After I have set a threshold, and selected the ROIs, I can pause
>> the macro
>> using
>>
>> while (isOpen("RGB")) {
>> wait(10);
>> }
>>
>> But during that time, when I click on an entry in ROI Manager, the
>> ROI does
>> not light up in the image window (i.e. with a yellow outline).
>> However, if I
>> scroll using my scroll wheel on my mouse, the yellow outlines do
>> appear. The
>> problem is that the scroll only selects every second entry in ROI
>> Manager!
>>
>> When the macro is finished, and I click on the ROI entries, the  
>> yellow
>> outlines appear with no problem.
>>
>> Any help with this would be much appreciated.
>>
>> Thanks,
>> Elisabeth
>
>
>
> --
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> during-a-macro-tp4512804p4513170.html
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