Bug in FindMaxima output (ImageJ 1.43o) ?

Posted by Jean-Christophe AME-2 on Feb 04, 2010; 3:09pm
URL: http://imagej.273.s1.nabble.com/Bug-in-FindMaxima-output-ImageJ-1-43o-tp3689500.html

Hi All,

I think I found a problem with Process>Binary>Find Maxima

When the result is equal to 0 (zero), the result doesn't go to the  
ouput window "results". Meaning that the counting value for that  
specific ROI is also not recorded.  This is important as I am setting  
an automatic counting system of particles (foci) within nuclei using  
this function.

Thanks for any help,


Jean-Christophe


It's on a Mac using 10.5.8. and the last java update.
here is the macro I wrote but it is the same when it is used manually.

*******************
i = 0;
do {
roiManager("Select", (i));run("Unsharp Mask...", "radius=1 mask=0.50");
run("Find Maxima...", "noise=18 output=Count");
i = i + 1;
  } while (i<= roiManager("count"));
***************************

________________________
Jean-Christophe Amé, PhD
Équipe "Poly(ADP-ribosyl)ation et intégrité du génome"
Institut de Recherche de l'École de Biotechnologie de Strasbourg
FRE3211 du CNRS - UdS
Université de Strasbourg
École Supérieure de Biotechnologie de Strasbourg
Pôle API
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