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average above threshold

Posted by Glen MacDonald-2 on Jan 25, 2010; 11:55pm
URL: http://imagej.273.s1.nabble.com/average-above-threshold-tp3689549.html

Hello,
Is it possible in ImageJ to create an Average projection over the z-axis that only includes pixel intensities above threshold?  We would like to get an average intensity plot along a structure but the tissue section is not completely flat.  

thanks,
Glen


Glen MacDonald
Core for Communication Research
Virginia Merrill Bloedel Hearing Research Center
Box 357923
University of Washington
Seattle, WA 98195-7923  USA
(206) 616-4156
[hidden email]