Posted by
Judy Trogadis on
Dec 16, 2009; 4:37pm
URL: http://imagej.273.s1.nabble.com/image-registration-tp3690005p3690007.html
Hi, Joel
Using XP operating system, I did create new folders in the Plugin folder - outside ImageJ, with Windows browser, copied the files into them, however, when I opened ImageJ, I did not see the newly created folders under the Plugins. Now, I moved the files into an already existing folder and saw the TurboReg option, and will try it now.
What extra steps are required when creating a new Plugin folder?
Thanks,
Judy
>>> "JOEL B. SHEFFIELD" <
[hidden email]> 12/16/2009 9:04 AM >>>
Hi Judy,
I have been using turbo/stackReg for some time without problems. You don't
say which operating system you are using, but in my Wondows XP, I unpack the
zip files that I download into new folders in the plugins directory. As as
a result, I now have two folders in the plugin directory --turboReg and
stackReg. What are you doing differently?
Joel
On Tue, Dec 15, 2009 at 9:26 PM, Judy Trogadis
<
[hidden email]>wrote:
> I am looking for a plugin for aligning serial sections. I came across a
> plugin - TurboReg, a collection of many CLASS files but can't find
> instructions for installation. It will not run by simply copying to a plugin
> folder. Same for StackReg (which requires TurboReg). Do other plugins exist?
>
> In the event that I do find such a plugin, what utilities are available for
> further processing an aligned stack? I am hoping to manually trace outlines,
> fully threshold inside the traces and use VolumeJ to reconstruct objects.
>
> I would appreciate any further suggestions.
> Thank you.
>
> Judy
>
> Judy Trogadis
> Bio-Imaging Coordinator
> St. Michael's Hospital, 7Queen
> 30 Bond St.
> Toronto, ON M5B 1W8, Canada
> ph: 416-864-6060 x6337
> pager: 416-685-9219
> fax: 416-864-5046
>
[hidden email]
>
--
Joel B. Sheffield, Ph.D
Department of Biology
Temple University
Philadelphia, PA 19122
Voice: 215 204 8839
e-mail:
[hidden email]
URL:
http://astro.temple.edu/~jbs