Problem in opening a file
Posted by aparna sadananda on Nov 10, 2009; 4:51pm
URL: http://imagej.273.s1.nabble.com/Problem-in-opening-a-file-tp3690501.html
Hi all,
I have a movie in oib format with a size of 24.5 MB. I have allotted a
memory of 1500 MB to Image J. But still, this file does not open. instead a
window opens up with the following:
java.lang.ArrayIndexOutOfBoundsException: Array index out of range: 999
at java.util.Vector.get(Unknown Source)
at loci.formats.in.FV1000Reader.openBytes(FV1000Reader.java:163)
at loci.formats.ChannelSeparator.openBytes(ChannelSeparator.java:140)
at loci.formats.ChannelSeparator.openBytes(ChannelSeparator.java:113)
at loci.formats.ReaderWrapper.openBytes(ReaderWrapper.java:187)
at loci.formats.DimensionSwapper.openBytes(DimensionSwapper.java:214)
at loci.plugins.Util.openProcessors(Util.java:104)
at loci.plugins.Importer.run(Importer.java:525)
at loci.plugins.LociImporter.run(LociImporter.java:72)
at ij.IJ.runUserPlugIn(IJ.java:177)
at ij.IJ.runPlugIn(IJ.java:143)
at ij.IJ.runPlugIn(IJ.java:131)
at HandleExtraFileTypes.openImage(HandleExtraFileTypes.java:253)
at HandleExtraFileTypes.run(HandleExtraFileTypes.java:37)
at ij.IJ.runUserPlugIn(IJ.java:177)
at ij.IJ.runPlugIn(IJ.java:143)
at ij.IJ.runPlugIn(IJ.java:131)
at ij.io.Opener.openWithHandleExtraFileTypes(Opener.java:337)
at ij.io.Opener.openImage(Opener.java:245)
at ij.io.Opener.openImage(Opener.java:268)
at ij.io.Opener.open(Opener.java:124)
at ij.io.Opener.open(Opener.java:63)
at ij.plugin.Commands.run(Commands.java:23)
at ij.IJ.runPlugIn(IJ.java:150)
at ij.Executer.runCommand(Executer.java:120)
at ij.Executer.run(Executer.java:58)
at java.lang.Thread.run(Unknown Source)
It is weird because another oib file of size 23.5 MB opens without any
problem. This is a movie of 240 frames in 512* 512 pixel format. And the one
that does not open is of 1200 frames but 100*24 pixel format.
What could be going wrong? Many thanks in advance to anyone who helps me
with this!
Aparna