Re: 3D volume rendering and measurement

Posted by Jean-Yves Tinevez-2 on Sep 15, 2009; 6:56am
URL: http://imagej.273.s1.nabble.com/3D-volume-rendering-and-measurement-tp3691087p3691089.html

On Sep 15, 2009, at 7:59 AM, Duleep Samuel wrote:

> I am sure you would have seen
> http://webscreen.ophth.uiowa.edu/bij/vr.htm, regards Samuel
>

Hi all,
You can also try the 3D viewer:

http://132.187.25.13/home/?category=Download&page=Viewer3D

who does it on the fly "a la" Imaris. It is packaged and pre-
configured in Fiji:

http://pacific.mpi-cbg.de/wiki/index.php/Main_Page

cheers
jy

> On Tue, Sep 15, 2009 at 11:11 AM, Joan Sim <[hidden email]>  
> wrote:
>> Dear all,
>> I would like to use WCIF ImageJ to perform 3D volume rendering and
>> calculation of the volume. May I know which plug-in or analysis  
>> module
>> should I use after obtaining Z-stack immunostained images from  
>> confocal
>> microscopy? Am I correct to say that I will have to import these  
>> images as
>> tiff files, and not other formats, for analysis purposes?
>>
>> I would greatly appreciate any advices on this matter. Thank you!
>>
>> Best regards,
>> Joan, PhD student
>> Singapore
>>

--
Jean-Yves Tinevez
PFID - Imagopole
Institut Pasteur
25-28, rue du Docteur Roux
75724 Paris cedex 15
France
tel: [phone]