Re: Plugin for conversion from MRC to TIFF

Posted by Thomas Boudier on
URL: http://imagej.273.s1.nabble.com/Plugin-for-conversion-from-MRC-to-TIFF-tp3691335p3691338.html

Hi,

MRC files are standard files with a header, normally size 1024 bytes,
and then you got the images, if you know the size of your images, you
can calculate your offset to get to the image you want, using
Import/Raw. You can also have a look to
http://u759.curie.u-psud.fr/softwaresu759.html for a MRC reader.

Thomas


Daniy a écrit :

> Thank you a lot,
>
> but I'm curious, ...is it possible to get only one specific image out of the
> MRC image stack, and get it converted to an JPEG or (preferable) TIFF file,
> instead of extracting all images out of the stack and get them into a TIFF
> or JPEG ?
>
> Daniyal
>
>
> Albert Cardona-2 wrote:
>> Daniy wrote:
>>> Greetings,
>>>
>>> during our project we came to a point where we do need to convert or
>>> better
>>> said extract images out of a MRC stack file. The extracted images should
>>> be
>>> than be available in the TIFF or JPEG file format. Therefore what we need
>>> is
>>> some sort of "MRC to TIFF/JPEG converter". Are currently any sort of
>>> plugins
>>> available for ImageJ, that can realize this ?
>>>
>>> Best regards
>>>
>>> Daniyal
>>>  
>>
>>
>> In Fiji there is an MRC importer, but I don't know how if it can handle
>> stacks. Most likely LOCI can.
>>
>> If so, just drag and drop your MRC file, then "File - Save as - Image
>> Sequence" and choose TIF or JPG for exporting each section as a single,
>> numbered image.
>>
>> Albert
>>
>> --
>> Albert Cardona
>> http://albert.rierol.net
>>
>>
>

--
   /**********************************************************/
      Thomas Boudier, MCU Université Pierre et Marie Curie,
      IFR 83. Bat B 7ème étage, porte 709, Jussieu.
      Tel : [phone]  Fax : [phone]
/*******************************************************/