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Re: 3D stitching Fluoview files

Posted by Glen MacDonald-2 on Jul 20, 2009; 8:41pm
URL: http://imagej.273.s1.nabble.com/3D-stitching-Fluoview-files-tp3691715p3691717.html

thanks, I had planned to use this plugin, it worked well with a small  
subset of stacks.  I was just hoping to avoid the extra effort to  
automate the operation myself,

It turns out the free offline Fluoview viewer is just that, a file  
viewer.  A full featured offline version that will perform the  
montages costs about US$2000, but does everything except control the  
confocal.

Glen
On Jul 20, 2009, at 12:22 PM, Johannes Schindelin wrote:

> Hi,
>
> On Mon, 20 Jul 2009, Glen MacDonald wrote:
>
>> Just wondering if someone has already written a macro or plugin to
>> sequentially open a set of confocal stacks collected from an Olympus
>> Fluoview 1000 confocal with the Multi-area timelapse controller and
>> stitch them into a 3D montage. The Olympus offline viewer is  
>> exceedingly
>> powerless, and I'm trying to avoid the need to schedule time on the
>> instrument in order to stitch together these large volumes.
>
> There is a plugin in Fiji:
>
> http://pacific.mpi-cbg.de/wiki/index.php/Stitching_2D/3D
>
> Ciao,
> Dscho