Re: Counting pixels above a certain grey value in a stack

Posted by Michael Doube-2 on Dec 05, 2007; 12:41pm
URL: http://imagej.273.s1.nabble.com/Counting-pixels-above-a-certain-grey-value-in-a-stack-tp3691747p3691755.html

You can do this with my macro:
http://doube.org/macros.html#vfb

Though you might have to hack it a bit to suit your system

Cheers

Mike



Dimiter Prodanov wrote:
> Even simpler. What you ask is basically the cumulative histogram.
> So make a macro; get the histogram per slice in the
> stack; sum up in an array
> and voila - you have your profile of intensities in z direction.
>
> Cheers
>
> Dimiter  Prodanov
>  

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Michael Doube  BPhil BVSc MRCVS
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