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Re: subcounting objects

Posted by ashish ram on Jun 21, 2009; 6:03am
URL: http://imagej.273.s1.nabble.com/subcounting-objects-tp3692066p3692069.html

Thanks a lot for your help.

On Sun, Jun 21, 2009 at 3:45 AM, Stoyan Pavlov <[hidden email]>wrote:

> Hi Paolo,
> I had similar problem recently. I solved it using the folowing macro.
> Please
> excuse me because I am not really good with the macro language and the
> macro
> is a bit sluggish but it worked for me. You can modify so it is more
> appropriate to your needs.Here it is:
>
> // This Macro counts particles inside specific Roi and otputs the number to
> TAB separated Log window which after saving can be imported to excel.
>        n = roiManager("count");
>        for (i=0; i<n; i++)  {
>        roiManager("select", i);
>         run("Analyze Particles...", "size=2-20 circularity=0.00-1.00
> show=Nothing display clear ");
>    m=nResults;
>        print (i,"    ",":","    ", m) ;
>
> Have a nice day!
> Stoyan Pavlov
>
>
>
> On Thu, Jun 18, 2009 at 1:39 PM, Paolo Ariano <[hidden email]>
> wrote:
>
> > Hi all,
> >
> > i'm trying to count spots in every cells ... so i've two pictures of the
> > same field of view:
> >
> > 1. the first picture shows the whole cells, so treshold and then analyze
> > particles and i obtain all the outlines saved and added to the
> > roi-manager
> >
> > 2. then i open the second image containing a lot of little spots inside
> > every cells area, now i'd like to count the spots number in every roi
> > i've in the roi-manager, how to finish the work ?
> >
> > thanks a lot
> > paolo
> > --
> > NeuroScience PhD
> > Post-doc @ University of Torino
> > www.personalweb.unito.it/paolo.ariano
> > www.cellular-neurophysiology.unito.it<
> http://www.personalweb.unito.it/paolo.ariano%0Awww.cellular-neurophysiology.unito.it
> >
> > www.mieleria.it
> >
>
>
>
> --
> Dr. Stoyan P. Pavlov, MD
> Departament of Anatomy, Histology and Embryology
> Medical University "Prof. Dr. Paraskev Stoyanov", Varna
> Prof. Marin Drinov Str.55
> 9002 Varna
> Bulgaria
> Tel: +359 (0) 52 - 677 - 050 #2638
> e-mail: [hidden email]
>