Re: LOCI Bioformats

Posted by dpoburko on
URL: http://imagej.273.s1.nabble.com/Re-LOCI-Bioformats-tp3692478.html

Hi All,

  A quick question on behalf of a colleague. He is using the LOCI
Bioformats importer in a macro to load Zeiss ".zvi" files for analysis.
Usually this goes smoothly, but when the LOCI importer cannot read a
file, it crashes the macro. He would like to incorporate some kind of
error handling step into his macro to step past the bad file and carry
on to the next file. At the moment, he is trying to use the Bioformats
Macro Extensions to find some parameter to use as a checkpoint, but he
having problems with the syntax of these extensions. If anyone has elt
with this problem and has any suggestions for how to keep the importer
for stopping a macro when it can't open a file we'd be all ears.

Many thanks,
Damon


--

Damon Poburko, PhD
Postdoctoral Research Fellow
Stanford University School of Medicine
Dept. of Molecular & Cellular Physiology
279 Campus Dr., Beckman B103, Stanford, CA 94305
Ph: 650 725 7564, fax: [phone]