Re: image J nd stack builder plugin

Posted by Fabrice Cordelières on Feb 16, 2009; 9:27pm
URL: http://imagej.273.s1.nabble.com/image-J-nd-stack-builder-plugin-tp3693700p3693702.html

Dear Vinay,

Metamorph has been changing the format of the nd file: I've updated  
the nd stack builder plugin so that it handles both old and new  
version, but didn't released it yet. I'll send it to you off-list.

Fabrice


Le 16 févr. 09 à 21:44, Vinay Singh a écrit :

>>
>> HI I am using the nd Stack builder plugin on a data set collected  
>> with metamorph Multidimensional acquisition. Image J 1.41 just says  
>> done and does not make the z projected stack. The data set is a 2  
>> color 15 Z stacks time lapse experiment.
>> I am using a Power Book G4 1.67Ghz 2GB RAM running leopard. The  
>> same data set works fine on PC's. I could use the plugin earlier  
>> when I was just doing one color  (1GB Total RAM) and everything  
>> worked fine. Tried it on the new Mac Pro unibody with 2.4Ghz 4GB  
>> RAM and have the same problem. I have tried reducing the number of  
>> time points with the same result. I have increased the memory to  
>> 75% of the real RAM and it still does not work. One difference is  
>> that the new file names are longer when you use 2 colors but  
>> Leopard should be able to deal with 255 characters in file names  
>> unlike older OS which would only  take 35 characters.
>>
>> Any solutions other than the nd stack builder? Does anyone else  
>> have the same problem. I am using Java 1.5 or that is what Image J  
>> says.
>>
>> vinay
>>
>>
>>
>>
>

Fabrice Cordelières, PhD

Institut Curie - Section de recherche/ CNRS UMR 146
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