Re: Image Segmenting/ Segmentation Assistant

Posted by dpoburko on
URL: http://imagej.273.s1.nabble.com/Image-Segmenting-Segmentation-Assistant-tp3693949p3693950.html

Wilson R S (AT) wrote:

> Hi Listers,
>
>  
>
> I am looking for a way off auto segmenting an image.
>
> I have a thresholded image with a few ROI's, I need a method/plugin/or
> algorithm that will automatically select these so that they can be cut
> and transferred to single images of their own.
>
> The segmentation assistant does what I need in a manual way, I want to
> try and skip the step of having to select the ROI by hand.
>
>  
>
> Any help would be much appreciated, even if its just to point me at a
> previous thread.
>
> I have searched the archive but couldn't find anything relevant.
>
>  
>
> Thanks in advance.
>
>  
>
> Rhod
>  

To clarify, are you looking for an algorithm that will automatically
determine threshold values for segmentation, or just to generate and
copy the regions once you have set the threshold manually?  Will you be
applying a  set threshold level to a  number of images?
Cheers,
Damon