Re: Reslice stack at various angles

Posted by J. Anthony Parker on
URL: http://imagej.273.s1.nabble.com/Reslice-stack-at-various-angles-tp3694050p3694056.html

You might look at Reorient3_TP, http://www.med.harvard.edu/JPNM/ij/plugins/Reorient3TP.html 
.  It may be more general than you are looking for, but I think it  
will do what you want.  It is part of an "Align Stacks" package, http://www.med.harvard.edu/JPNM/ij/plugins/ 
.  The Alignment plugin has a manual which explains how it works.  
Several of the operations are the same or similar.

Tony
J. Anthony Parker, MD PhD
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tel [phone] fax -2185 comp -5275
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330 Brookline Ave, Boston, MA, 02215-5400


On Jan 7, 2009, at 2:56 PM, Bob Nienhuis wrote:

> Is there a way to do a reslice of an image stack at some
> arbitrary angle in the Z axis?
>
> I understand that reslice allows you to draw a line
> in the XY plane of a stack and create a new
> slice orthogonal to that plane.
>
> I want to reslice in various angles in the Z axis.
>
> I realize this can be computationally  intensive,
> but I will be doing this on small cropped stacks
> on a 64 bit quad core system.
>
> Bob Nienhuis
> UCLA / VA Medical Center
>