Re: doesn't recognize ratio command?

Posted by John Alexander-7 on Nov 20, 2008; 5:16am
URL: http://imagej.273.s1.nabble.com/doesn-t-recognize-ratio-command-tp3694424p3694432.html

Yes, if I recall correctly, I copied the Ratio.lut into the luts/ and
lut/ folders.  Also I named it BOTH Ratio.lut AND Ratio_.lut

I'm sure that all of it isn't necessary, but it worked and I didn't want
to waste the time trying to figure it all out.

There was another problem with the ICA plugin - some of the dialog
commands weren't macro friendly, so, I got the source code and modified
it to be macro friendly.

I can't post the fixed plugin, so I'll just email it to you directly.

John



Cedric Asensio wrote:

> Hi Gretchen,
>
> i know this post is kind of old, but i have encountered a similar problem
> than you when using the ICA plugin "unrecognized command: ratio". did you
> find a way around this?
>
>
> thanks
>
> Cedric Asensio
>
>
> Gretchen Unger, Ph.D. wrote:
>> Hi all,
>>
>> Still trying to get the ICA plugin to run. I have put a copy of
>> Ratio.lut in a folder entitled "luts" outside the plug-in folder and
>> inside the plug-in folder in subfolders entitled "LUT" and "luts". Of
>> these last two folders, the LUT folder had lots of files in it while
>> the luts folder had not so many, all of which had a dark icon
>> different looking from the files in the "luts" folder outside the
>> plugin folder. The plug-in comes back with the error message
>> "unrecognized command: ratio".  Thanks in advance for any thoughts.
>> gretchen
>>
>>> Ratio.lut is a lookup table included with the MBF bundle in both the
>>> lut and luts folders. The plugins only version, however, is missing
>>> the luts folder. As a result, there is no "Ratio" command in the
>>> Image>Lookup Tables menu (LUTs in the luts folder are listed in this
>>> menu). You can work around this problem by making a copy of the lut
>>> folder and naming it luts. You can't simply change the name from lut
>>> to luts because the ICA plugin looks for another LUT (ICA.lut) in
>>> the lut folder.
>>>
>>> -wayne
>>>
>>> On Jan 13, 2008, at 8:42 PM, Gretchen Unger, Ph.D. wrote:
>>>
>>>> Hi all,
>>>>
>>>> A very simple question.......I would like to use intensity
>>>> correlation analysis in the MBF bundle with the latest Image J
>>>> v1.38. The plugins show up in the pulldown menu on my Mac (tiger
>>>> not leopard OSX), I can run all the plugins in the colocalization
>>>> analysis folder but ICA and Manders. The ICA plug in comes back and
>>>> says " no ratio command". Any ideas? I know this is a dumb
>>>> question,but  I've reloaded everything several times and it still
>>>> does it.
>>>>
>>>> Thanks,
>>>> Gretchen Unger
>>>> [hidden email]
>>
>> --
>> _________________________________________________________________________
>> Gretchen M. Unger, Ph.D.
>> Research-151, 3q-120
>> VA Medical Center
>> One Veterans Drive
>> Minneapolis, Minnesota   55417
>>
>> email: [hidden email]
>> Tel:   [phone]
>> FAX:  [phone]
>> __________________________________________________________________________
>>
>>
>

--
John K. Alexander, Ph.D.
Post-Doctoral Fellow
William Green Laboratory
University of Chicago
Dept. Neurobiology, Pharmacology, and Physiology
947 East 58th Street
Abott Hall 402
Chicago, IL 60637
(off) 773-702-9386
(fax) 773-702-3774
[hidden email]