Re: problem accessing the mask generate from the ParticleAnalyzer class

Posted by Wayne Rasband on Oct 19, 2008; 10:11pm
URL: http://imagej.273.s1.nabble.com/problem-accessing-the-mask-generate-from-the-ParticleAnalyzer-class-tp3694689p3694690.html

> Hi everyone,
> I'm currently trying to write my first plugin and I'm having some
> trouble with whit ParticleAnalyzer class. My problem is that I want to
> use the mask output as a mask for my next step but I can't figure out
> how to access the newly generated image. Anyone has suggestion on  
> how to
> do it?
>
> Here is the code lines that I managed so far.
>     rt = new ResultsTable();
>     this.PA = new ParticleAnalyzer(5128, 113050, rt, Min_Area,  
> Max_Area,
> Min_Circ, Max_Circ);
>     for(i; i<=stack.getSize(); i++){
>         this.PA.analyze(imp, ip);
>        // long unfished code
>     }
>     rt.show("Resultats test");

The ParticleAnalyze class in the ImageJ 1.41o daily build has a  
getOutputImage() method that returns the newly generated image.

     ImagePlus mask = PA.getOutputImage();

-wayne