Re: Fiber Meshwork Analysis

Posted by Sudhakar Jaganathan on Sep 29, 2008; 10:36pm
URL: http://imagej.273.s1.nabble.com/Whole-Brain-Volume-tp3694870p3694874.html

Hi,

I don't know about imagej, you could try 3dma-fiber or 3dma software for
3-d medial axis analysis.it use to be open source.

Sudhakar



Hi Everybody,

>
> Can anyone point me in a direction to analyze fiber meshwork structures?
> I have z-stack series of collagen fiber meshworks, and I need to
> quantify and compare structure differences in varying samples. Basic
> differences include spacing and fiber density, branching angles, length,
> geometry of open spaces in meshwork, but I would also be interested in
> any other structural aspects that may help me identify differences in
> these meshworks.
>
> Image J plug-ins was my first target for answers, but I am open to other
> platforms as well. If anyone knows of other folks who have done similar
> things, I would be interested in references to articles that may contain
> information of how they analyzed fiber meshwork structural differences
> and what they quantified as well.
>
> The images are quite similar to what you might find in textile meshworks
> and paper fiber meshworks as well - any sources in those fields is also
> certainly welcome.
>
> Thanks very much!!!
>
> Geoff
>

--
Sudhakar Jaganathan

North Carolina State University
Nonwovens Cooperative Research Center
College of Textile
NC-USA