Posted by
ctrueden on
Sep 29, 2008; 4:05pm
URL: http://imagej.273.s1.nabble.com/how-integrate-bioFormat-with-imagej-tp3694911p3694912.html
Hi Prashant,
Images opened using the Bio-Formats plugin should function the same as any
other images. You can process them with plugins and macros the same way. The
only thing to watch out for is to avoid opening images as virtual stacks,
because while that option will save you a large amount of memory and is good
for browsing, you will not be able to perform image manipulation operations
unless you first convert to a normal stack using Image>Duplicate, as
described in this thread from the archive: <
https://list.nih.gov/cgi-bin/wa?A2=ind0809&L=imagej&H=1&P=15187>.
-Curtis
On Sun, Sep 28, 2008 at 11:46 PM, prashant <
[hidden email]> wrote:
> Hi everyOne,
>
> I am opening my multiframe compressed dicom image through
> bio-format.jar
> and Uncompressed images through Imagej.jar.
>
> I want to apply rotate,flip,invert option with images those are open
> with bio-Format.jar.
> How can i integrate i.e. how can i perform such operation with images
> those are opened with bio-Format.jar.
>
> It is same as when you open images in
> imagej--->plugIns---->LOCI---->bioFormat importer
> Option.And you perform all operation with those image in Imagej.
>
> Thanks
>
> With Warm Regards
> --------------------------------------------------------------------
>
> Prashant Chandrakar
> Software Developer
> MedSynaptic Pvt Ltd
> 9270710943
>
[hidden email]
>
> "If the facts don't fit the theory, change the facts."
>