Re: Cell Counter plugin with a modification?

Posted by Bill Mohler on Aug 25, 2008; 7:26pm
URL: http://imagej.273.s1.nabble.com/Object-Image-successor-tp3695259p3695262.html

I think I've found the line(s) of code that would need to be changed
to allow this toggle behavior:  In File CellCntrImageCanvas.java,
within class imageWithMarkers, is an "if
(m.getZ()==img.getCurrentSlice()){" statement.  It seems the logic of
that statement and the following lines of code that govern display
would be all that need to be changed to effect the toggling
display-all/display-in-slice behavior.

Bill

>I have been recently using the Cell Counter plugin written by Kurt
>de Vos.  A very useful utility.
>
>As I'm working with densely populated 3D stacks, it would actually
>be useful if I could toggle the display such that every cell marker
>is displayed (and not only those that are in the current section).
>Being able to interchangeably see all markers in the volume or only
>those in the current section would enhance my ability to account for
>objects that extend through several sections.
>
>I haven't seen the option in the plugin dialog/control panel, and I
>wonder if it already exists or could be easily added.  Let me know
>if this request is unclear, and I can explain further.
>
>Bill
>--
>-----------------
>William A. Mohler
>Associate Professor
>Dept. of Genetics and Developmental Biology
>University of Connecticut Health Center
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