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new bUnwarpJ release (consistent elastic image registration)

Posted by Ignacio Arganda Carreras on Jun 13, 2008; 2:36pm
URL: http://imagej.273.s1.nabble.com/new-bUnwarpJ-release-consistent-elastic-image-registration-tp3695914.html

Dear all,

I just uploaded a new version of bUnwarpJ on the site:

http://biocomp.cnb.csic.es/~iarganda/bUnwarpJ/

It comes with a new set of options,  you can now
- load masks from files.
- evaluate the initial similarity between images.
- load affine transformations as starting point for the algorihtm.
- use the result of automatic landmark detections such as MOPS and SIFT
(see
http://biocomp.cnb.csic.es/~iarganda/bUnwarpJ/#SIFT_and_MOPS_plugin_support_)

bUnwarpJ and SplineDeformationGenerator are now integrated in Fiji:

http://pacific.mpi-cbg.de/wiki/index.php/Main_Page

Hope you'll enjoy it! All feedback will be appreciated!

cheers!

ignacio

PS: SplineDeformationGenerator has also a new version so it can run on
Fiji, but there is no important changes in the code:
http://biocomp.cnb.csic.es/%7Eiarganda/SplineDeformationGenerator/


--
Ignacio Arganda-Carreras
Escuela Politécnica Superior
Laboratorio B-408     Phone: (+34) 91 497 2260
Universidad Autónoma de Madrid
Ctra. de Colmenar Viejo, Km. 15
Madrid 28049,  Spain

E-mail: [hidden email]
Website: http://www.ii.uam.es/~iarganda