Posted by
Colin Poczatek on
Apr 02, 2008; 1:13pm
URL: http://imagej.273.s1.nabble.com/Visualize-orthogonal-views-3D-reconstruction-tp3696642p3696659.html
One thing I've been playing around with is Visit from LLNL.
https://wci.llnl.gov/codes/visit/It can open a stack of tifs from a image list file (ie a text file with
the path to each image), do an intensity volume plot, orthogonal
views/thresholds etc.
But, it's not simple/small software (it was written to render/visualize
terabyte sized datasets), and the UI isn't exactly intuitive.
I've run it on a Linux/Core2Duo and a OSX/G4 machine, so it's pretty
platform agnostic.
Hope that helped,
Collin
Quoting Christophe Leterrier <
[hidden email]>:
> Dear all,
>
> I have Zstacks (.tif format) that I would like to visualize as orthogonal
> views and/or 3D reconstructions. I tried the ImageJ OrthView plugin but it
> is very slow and buggy. Volume Viewer plugin is also quite slow. Do you
> recommand any free software, preferably OSX or multi-platform, that can
> handle thse task with a reasonnable performance (I'm on an iMac Core2Duo
> 2.4 GHz, 2Go RAM). I tried BioImageXD but it is very unstable. I wanted to
> try Osirix but I don't know if it handles .tif files and also it is OSX 10.5
> only (I'm under 10.4).
>
> Any other propositions ?
>
> Christophe Leterrier
>
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