Re: FRAP plugin

Posted by Tony Collins-4 on Apr 05, 2008; 5:11pm
URL: http://imagej.273.s1.nabble.com/FRAP-plugin-tp3696675p3696677.html

I've sent the plugin to Jeff offline.

Jeff has also raised the point that a custom fit for the curvefitter class would be nice as, with FRAP, one type of fit does not fit all!

I thought there was a custom curvefitter plugin but I can't locate it now. Has anybody an example of the curvefitter being used with a custom equation?

Cheers,

Tony


________________________________________
From: ImageJ Interest Group [[hidden email]] On Behalf Of Curtis Rueden [[hidden email]]
Sent: Friday, April 04, 2008 5:14 PM
To: [hidden email]
Subject: Re: FRAP plugin

Hi Jeff,

According to the MBF version log, the FRAP profiler plugin was added on Aug
28. If the latest bundle doesn't have it, it must be an omission in the
distribution.

As for Olympus FluoView 1000 format, you know that Bio-Formats can read
FV1000 OIF & OIB formats, right?

Hopefully the MacBiophotonics site will be back online soon...

-Curtis

On Tue, Apr 1, 2008 at 8:22 AM, Jeff Hardin <[hidden email]> wrote:

> Dear Friends,
>
> Although the site appears to be down this morning, i noticed that Tony
> Collins describes a FRAP_Profiler plugin on the McMaster Biophotonics web
> site:
>
> http://www.macbiophotonics.ca/imagej/intensity_vs_time_ana.htm#FRAP
>
> However, it doesn't seem to be in the downloadable version of his
> collection. Did I miss something? Might anyone have this or know where it's
> available?
>
> Better yet, does anyone have an ImageJ plugin that can handle data from an
> Olympus FluoView 1000 for doing curve fitting of FRAP data generated by this
> system? I'd like to avoid multiple applications if possible...
>
> Many thanks,
>
> Jeff
> ----------------------------------------------
> Jeff Hardin
> Professor, Department of Zoology
> Director, Biology Core Curriculum
> University of Wisconsin
> 1117 W. Johnson St.
> Madison, WI 53706
> voice: [phone]
> fax: [phone]
> email: [hidden email]
>