Re: frame-by-frame processing of large stacks?

Posted by Burger Wilhelm on Nov 21, 2007; 8:08am
URL: http://imagej.273.s1.nabble.com/frame-by-frame-processing-of-large-stacks-tp3697953p3697956.html

John,
 
you may want to check the MovieIO package (available at my web site http://www.fh-hagenberg.at/staff/burger/imagej/index.html) for this. It allows to read or write (or both) and process video files frame by frame. It only uses a single ImageProcessor object for this task.
 
Regards,
Wilhelm

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Von: ImageJ Interest Group im Auftrag von John R. Frank
Gesendet: Di 20.11.2007 22:30
An: [hidden email]
Betreff: frame-by-frame processing of large stacks?



Is there a way to convert a large stack into a .avi or .mov without
loading the whole thing into RAM?  Perhaps some command line call to
imagej that allows it to process it frame-by-frame?

I have multipage TIFFs that are a >1.5GB, so the 32-bit JVM limits prevent
me from making a movie from them with ImageJ's GUI.  I hope there is
another way.

Thank you for your help!

Yours,
John


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John R. Frank <[hidden email]>
Physics Graduate Student