http://imagej.273.s1.nabble.com/batch-measurements-to-single-data-file-tp3697980p3697982.html
Super! I knew it would be something simple like that.
> Remove 'clear' from
>
> run("Analyze Particles...", "size=0.15-Infinity
> circularity=0.00-1.00 show=Nothing display exclude clear");
>
> It is equivalent to checking "Clear Results" in the Analyze Particles
> dialog box.
>
> -wayne
>
>
> On Nov 19, 2007, at 12:27 PM, Justin Walker wrote:
>
>> I have put together a simple macro to (batch) perform various
>> manipulations and then measure particle diameters for a series of
>> several hundred images of liquid droplets. Everything works fine,
>> except for each image that runs, the results window discards the data
>> from the previous image.
>>
>> I'm sure there is a simple way to change that, but I've been
>> searching the documentation and mailing list archives all morning and
>> haven't been able to find anything useful. Is there a simple way to
>> have the data from previous measurements preserved when a new image
>> is opened and processed? Alternatively, is there a way I can have
>> the results dumped to a data file (but a single data file for all the
>> data with each measurement on a new line?). I tried having a save as
>> command as part of my macro, but it kept trying to over-write the
>> data file on each iteration.
>>
>> I have attached my macro.
>>
>> Thanks;
>>
>> - Justin Walker, Ph. D. Student
>> University of Maryland
>> College Park, MD, USA
>>
[hidden email]
>> 301-405-1920
>> macro "Batch Particle Size" {
>> dir = getDirectory("Choose a Directory ");
>> list = getFileList(dir);
>> setBatchMode(true);
>> for (i=0; i<list.length; i++) {
>> path = dir+list[i];
>> showProgress(i, list.length);
>> if (!endsWith(path,"/")) open(path);
>> if (nImages>=1) {
>> run("Deinterlace ");
>> run("8-bit");
>> setAutoThreshold();
>> //run("Threshold...");
>> setAutoThreshold();
>> setThreshold(0, 164);
>> run("Convert to Mask");
>> run("Fill Holes");
>> run("Watershed");
>> run("Analyze Particles...", "size=0.15-Infinity
>> circularity=0.00-1.00 show=Nothing display exclude clear");
>> close();
>> }
>> }
>> }