Posted by
Shawn Mikula-2 on
Aug 15, 2007; 5:00pm
URL: http://imagej.273.s1.nabble.com/area-calculator-tp3698608p3698617.html
thanks Dscho. I've looked into TrakEM2 but it seems that this is more
geared towards montaging applications using EM images. Also the idea of
storing image tile locations in a Postgres db becomes unreasonable if you
have millions of image tiles to deal with, and would be inefficient since
the address for image tile locations is based on coordinates within the
multiresolution image and can be computed using a fairly simple routine
(rendering db storage unnecessary). However, I have been discussing this
problem over with TrakEM2's creator, Albert Cardona, to see whether and what
can be done for working with massive multiresolution images in ImageJ.
thanks again.
Shawn
----- Original Message -----
From: "Johannes Schindelin" <
[hidden email]>
To: "Shawn Mikula" <
[hidden email]>
Cc: <
[hidden email]>
Sent: Wednesday, August 15, 2007 7:29 AM
Subject: Re: Partially Loading Massive Multiresolution Images Into ImageJ
> Hi,
>
> On Tue, 14 Aug 2007, Shawn Mikula wrote:
>
>> I would like to use ImageJ's analysis routines and plugins on massive
>> multiresolution images. However, there is no way to work with these
>> images in ImageJ, though there are simple Javascript/dHTML routines for
>> working with them on the web (for example, see
>>
http://brainmaps.org/ajax-viewer.html?path=http://brainmaps.org/HBP2/c.aethiops/AGM1/AGM1-highres/350/&height=78181&width=92160>> ) . I was wondering, is it possible to code an ImageJ plugin that will
>> enable the importation of these types of massive multiresolution images,
>> so that for example, they could be partially loaded into ImageJ and
>> analysis routines run on portions of the images?
>
> Seems you are looking for TrakEM2 (see Plugins page on ImageJ's home
> page).
>
> Hth,
> Dscho