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Re: JACoP problem

Posted by Michael Cammer on Jun 20, 2007; 6:01pm
URL: http://imagej.273.s1.nabble.com/JACoP-problem-tp3699044p3699047.html

I just realized that the Pearson's may not use the threshold.  Should
we be subtracting the background to zero before running this to avoid
getting correlation from bg pixels?

Thanks.


At 12:32 PM 06/20/07, you wrote:

>Thanks.
>
>I did this which got rid of the error message, but the software
>appears to disregard a manual change in the threshold settings.
>
>-Michael
>
>At 12:05 PM 06/20/07, you wrote:
>>This is a command recorder error. You can avoid it by closing the
>>Recorder window. The recorder is displaying this error because the
>>first dialog displayed by the JACoP plugin has two labels that start
>>with the word "Image". To fix the problem, change the labels to
>>"Image_A" and "Image_B" and recompile.
>>
>>-wayne
>>
>>On Jun 20, 2007, at 10:53 AM, Michael Cammer wrote:
>>
>>>We are having problems with the JACoP plugin and would appreciate help.
>>>
>>>The plugin worked for a while and then began giving the following
>>>error:
>>>
>>>Duplicate keyword:
>>>Command:  "JACoP"
>>>Keyword: "image"
>>>Value: green
>>>Add an underscore to the corresponding label
>>>in the dialog to make the first word unique.
>>>
>>>It then continues to run but always prints out the same r= value for
>>>any given pair of images regardless of how we set the threshold.
>>>
>>>We're using 1.38u with Java 1.5.0_09.
>>>
>>>Thanks.
>>>_______________________________________________________________________
>>>_____
>>>Michael Cammer   Analytical Imaging Facility   Albert Einstein Coll.
>>>of Med.
>>>URL:  http://www.aecom.yu.edu/aif/
>
>____________________________________________________________________________
>Michael Cammer   Analytical Imaging Facility   Albert Einstein Coll. of Med.
>URL:  http://www.aecom.yu.edu/aif/

____________________________________________________________________________
Michael Cammer   Analytical Imaging Facility   Albert Einstein Coll. of Med.
URL:  http://www.aecom.yu.edu/aif/