http://imagej.273.s1.nabble.com/3D-reconstruction-I-need-help-tp3699189p3699197.html
I tried the ImageJ 3D reconstruction plugin below, and receive the following
> Hi Emilio,
>
> I would just like to point you to our homepage. We have worked on plugins
> regarding segmentation and
> 3D reconstruction. Our segmentation tool is mainly made for manual
> segmentation, so it may not be what
> you are looking for, but we can help you with the 3D reconstruction of
> the segmented images.
>
> Our segmentation editor can be found at
>
http://132.187.25.13/bene/my/?category=Download&page=SegmentationEditor>
> the 3D reconstruction and visualisation plugin at
>
http://132.187.25.13/bene/my/?category=Download&page=Viewer3D>
> We are working with flies, so all the screenshots you find there are made
> from fly brains, but nevertheless
> the software is not restricted to that.
>
> Best wishes,
>
> Benjamin
>
> On Jun 7, 2007, at 2:26 PM, Emilio Bedatou wrote:
>
>> Hello!
>>
>> I'm new in the list and this is my first message.
>>
>> I need help to reconstruct in 3D a burrow system that is inside of a
>> rock. Yes, its a fossil. It is a complex network of interconected
>> burrows. Burrows are not empty, they are filled with rock, but slightly
>> different to the enclosing rock. So a difference of density is between
>> rock and burrow sufficient for to be detected in a tomograph.
>> I've scanned the sample in a conventional medical scanner and then, I
>> have a lot of images of sections, spaced every 1 mm, of the sample.
>>
>> I need help for
>> 1) In every image to select atomatically the
>> zones corresponding to burrows and then to eliminate the rest of the
>> image; and
>> 2) with the resulting series of images of
>> "burrows sections" to make a three dimensional reconstruction of the
>> burrow system.
>>
>> My computer skills have been exceeded when I tried to do it alone
>> using ImageJ, in fact I never use any other images software than
>> Photoshop or similar.
>>
>> If someone can help me or at least tell me if it is, or not, possible
>> of make using ImageJ I will be very grateful.
>>
>> Also if someone know about other software that can help me, please let
>> me know.
>>
>> Thanks to all of you
>>
>> Sincerely
>>
>> Emilio Bedatou
>> CONICET-UNLPam
>> Av. Uruguay 151
>> Santa Rosa-La Pampa
>> Argentina
>>
>> ---------------------------------
>> Preguntá. Respondé. Descubrí.
>> Todo lo que querías saber, y lo que ni imaginabas,
>> está en Yahoo! Respuestas (Beta).
>> ¡Probalo ya!