Re: How to do frame averaging?

Posted by Tony Collins-4 on
URL: http://imagej.273.s1.nabble.com/How-to-do-frame-averaging-tp3700186p3700189.html

There's Nico Stuurman's Running Zprojector plugin:
http://valelab.ucsf.edu/~nico/IJplugins/Running_ZProjector.html
(You can think of it as a Running TProjector also - sometimes ImageJ
assumes the third dimension is Z but it can equally be T, e.g. "Plot
Z-axis profile" is the same as "Plot intensity vs time").

Have a look at Christopher Philip Mauer's Kalman Filter plugin too.
http://rsb.info.nih.gov/ij/plugins/kalman.html

Regards,
Tony

Tony J. Collins, Ph.D.
McMaster Biophotonics Facility
Dept. Biochemistry and Biomedical Sciences HSC 4H21A
McMaster University, Hamilton, ON, L8N 3Z5
[phone] x28812(off.)/x26488(lab)
[hidden email]     www.macbiophotonics.ca

> -----Original Message-----
> From: ImageJ Interest Group [mailto:[hidden email]] On Behalf Of
> Mikinka
> Sent: Sunday, March 04, 2007 7:45 AM
> To: [hidden email]
> Subject: How to do frame averaging?
>
> Hi all,
>
> I am doing live cell imaging and I would like to do frame averaging

such
> as
> getting average of 30 image frames to improve signal to background
noise
> ratios. I'm new to ImageJ. Any help would be greatly appreciated.
>
> Thanks!
> Mikinka
>
> --
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> averaging--tf3342300.html#a9295533
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