Re: Renaming files 1-99

Posted by Daniel Glen on
URL: http://imagej.273.s1.nabble.com/Re-Renaming-files-1-99-tp3700601p3700605.html

For another kludge, there was this posting in October:
https://list.nih.gov/cgi-bin/wa?A2=ind0610&L=imagej&H=1&P=12039

On Jan 10, 2007, at 12:46 PM, Jeff Hardin wrote:

> Dear Grant,
>
> I had to write a plugin for this for Perkin-Elmer confocal stack  
> files. There's no other way I could figure out how to do this. I  
> should release this on the ImageJ web site, but need to clean it up  
> and comment the code. It involves (a) knowing your naming  
> structure; and (b) adding "0"s to pad the file name. The problem is  
> that where these zeroes have to go depends on the naming structure,  
> so there is no universal renamer that can realistically work.
>
> Hope that helps...
>
> Cheers,
>
> Jeff
> ----------------------------------------------
> Jeff Hardin
> Professor, Department of Zoology
> Director, Biology Core Curriculum
> University of Wisconsin
> 1117 W. Johnson St.
> Madison, WI 53706
> voice: (608) 262-9634
> fax: (608) 262-7319
> email: [hidden email]
>
>
> On Jan 4, 2007, at 11:00 PM, IMAGEJ automatic digest system wrote:
>
>> Date:    Thu, 4 Jan 2007 12:38:15 -0800
>> From:    "McAuley, Grant (LLU)" <[hidden email]>
>> Subject: Raw Image Stacks: Image Ordering/Reordering
>>
>> Sorry if this has been asked before (searched list archives -  
>> maybe not right combination of words?).
>>
>> I need to import stacks of raw images using File->Import->Raw and  
>> selecting 'Open All Files in Folder'.  The images have filenames  
>> that contain letters and numbers: zz-1, zz-2, ... , zz-10,  
>> zz-11, ..., zz-48.
>>
>> When the stack gets created the order becomes: zz-1, zz-10,  
>> zz-11, ... , zz-2, zz-21, ... instead of what I want: zz-1,  
>> zz-2, ..., zz-10, zz-11, ...
>>
>> 1) Can I tell ImageJ to do a numeric instead of alpha sort on the  
>> filename numbers when the stack is created?
>> 2) If not, is there a better way to resort the stack than the  
>> 'Stack Sorter' plugin (nice, but tedious for 48 images/stack)?