Posted by
Walter Wolf on
Jan 04, 2007; 9:14pm
URL: http://imagej.273.s1.nabble.com/Raw-Image-Stacks-Image-Ordering-Reordering-tp3700697p3700702.html
Grant:
What I do (and I have normally over 200 images) is to rename the single digit files to 3 digits - e.g. .xx.1.IMA to .xx.001.IMA. If you have less than 99 images, you only need to renumber the 1-9 series.
Professor Walter Wolf, Ph.D.
Distinguished Professor of Pharmaceutical Sciences
Director, Pharmacokinetic Imaging Program
Department of Pharmaceutical Sciences, School of Pharmacy
Chair, Biomedical Imaging Science Initiative
University of Southern California
1985 Zonal Ave., Los Angeles, 90089-9121
Tel: 323-442-1405
Fax: 323-442-9804
E-mail:
[hidden email]
PLEASE NOTE NEW WEBSITE
http://www.usc.edu/research/initiatives/bisi/http://www.usc.edu/schools/pharmacy/faculty_directory/detail.php?id=59
----- Original Message -----
From: "McAuley, Grant (LLU)" <
[hidden email]>
Date: Thursday, January 4, 2007 1:08 pm
Subject: Raw Image Stacks: Image Ordering/Reordering
To:
[hidden email]
> Sorry if this has been asked before (searched list archives - maybe
> not right combination of words?).
>
> I need to import stacks of raw images using File->Import->Raw and
> selecting 'Open All Files in Folder'. The images have filenames
> that contain letters and numbers: zz-1, zz-2, ... , zz-10, zz-11,
> ..., zz-48.
>
> When the stack gets created the order becomes: zz-1, zz-10, zz-11,
> ... , zz-2, zz-21, ... instead of what I want: zz-1, zz-2, ..., zz-
> 10, zz-11, ...
>
> 1) Can I tell ImageJ to do a numeric instead of alpha sort on the
> filename numbers when the stack is created?
> 2) If not, is there a better way to resort the stack than the
> 'Stack Sorter' plugin (nice, but tedious for 48 images/stack)?
>